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| |InsightToolkit | | |InsightToolkit |
| |Insight Toolkit | | |Insight Toolkit |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/InsightToolkit/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.itk.org]] | + | |[[https://svnweb.freebsd.org/ports/head/science/InsightToolkit/pkg-descr?revision=HEAD]] [[http://www.itk.org]] |
| |- | | |- |
| |OpenSim-core | | |OpenSim-core |
| |Software for modeling of musculoskeletal structures | | |Software for modeling of musculoskeletal structures |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/opensim-core/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://opensim.stanford.edu/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/opensim-core/pkg-descr?revision=HEAD]] [[http://opensim.stanford.edu/]] |
| |- | | |- |
| |R-cran-AMORE | | |R-cran-AMORE |
| |MORE flexible neural network package | | |MORE flexible neural network package |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-AMORE/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://rwiki.sciviews.org/doku.php?id=packages:cran:amore]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-AMORE/pkg-descr?revision=HEAD]] [[http://rwiki.sciviews.org/doku.php?id=packages:cran:amore]] |
| |- | | |- |
| |R-cran-DCluster | | |R-cran-DCluster |
| |Functions for the detection of spatial clusters of diseases | | |Functions for the detection of spatial clusters of diseases |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-DCluster/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/DCluster/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-DCluster/pkg-descr?revision=HEAD]] [[http://cran.r-project.org/web/packages/DCluster/]] |
| |- | | |- |
| |R-cran-Epi | | |R-cran-Epi |
| |Package for statistical analysis in epidemiology | | |Package for statistical analysis in epidemiology |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-Epi/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/Epi/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-Epi/pkg-descr?revision=HEAD]] [[https://cran.r-project.org/web/packages/Epi/]] |
| |- | | |- |
| |R-cran-bayesm | | |R-cran-bayesm |
| |Bayesian Inference for Marketing/Micro-econometrics | | |Bayesian Inference for Marketing/Micro-econometrics |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-bayesm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.perossi.org/home/bsm-1]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-bayesm/pkg-descr?revision=HEAD]] [[http://www.perossi.org/home/bsm-1]] |
| |- | | |- |
| |R-cran-cmprsk | | |R-cran-cmprsk |
| |Subdistribution Analysis of Competing Risks | | |Subdistribution Analysis of Competing Risks |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-cmprsk/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/cmprsk/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-cmprsk/pkg-descr?revision=HEAD]] [[https://cran.r-project.org/web/packages/cmprsk/]] |
| |- | | |- |
| |R-cran-e1071 | | |R-cran-e1071 |
| |Misc Functions of the Department of Statistics (e1071), TU Wien | | |Misc Functions of the Department of Statistics (e1071), TU Wien |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-e1071/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/e1071/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-e1071/pkg-descr?revision=HEAD]] [[https://cran.r-project.org/web/packages/e1071/]] |
| |- | | |- |
| |R-cran-eco | | |R-cran-eco |
| |R Package for Ecological Inference in 2x2 Tables | | |R Package for Ecological Inference in 2x2 Tables |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-eco/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://imai.princeton.edu/software/eco.html]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-eco/pkg-descr?revision=HEAD]] [[http://imai.princeton.edu/software/eco.html]] |
| |- | | |- |
| |R-cran-epicalc | | |R-cran-epicalc |
| |Epidemiological calculator | | |Epidemiological calculator |
− | |[[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/epicalc/]] | + | |[[http://cran.r-project.org/web/packages/epicalc/]] |
| |- | | |- |
| |R-cran-etm | | |R-cran-etm |
| |Empirical Transition Matrix | | |Empirical Transition Matrix |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-etm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/etm/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-etm/pkg-descr?revision=HEAD]] [[https://cran.r-project.org/web/packages/etm/]] |
| |- | | |- |
| |R-cran-fastICA | | |R-cran-fastICA |
| |FastICA Algorithms to Perform ICA and Projection Pursuit | | |FastICA Algorithms to Perform ICA and Projection Pursuit |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-fastICA/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://CRAN.R-project.org/package=fastICA]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-fastICA/pkg-descr?revision=HEAD]] [[https://CRAN.R-project.org/package=fastICA]] |
| |- | | |- |
| |R-cran-kernlab | | |R-cran-kernlab |
| |Kernel-Based Machine Learning Lab | | |Kernel-Based Machine Learning Lab |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-kernlab/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/kernlab/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-kernlab/pkg-descr?revision=HEAD]] [[https://cran.r-project.org/web/packages/kernlab/]] |
| |- | | |- |
| |R-cran-psych | | |R-cran-psych |
| |Psych package for the R project | | |Psych package for the R project |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/R-cran-psych/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/psych/index.html]] | + | |[[https://svnweb.freebsd.org/ports/head/math/R-cran-psych/pkg-descr?revision=HEAD]] [[http://cran.r-project.org/web/packages/psych/index.html]] |
| |- | | |- |
| |R-cran-snow | | |R-cran-snow |
| |Support for simple parallel computing in R | | |Support for simple parallel computing in R |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-snow/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/snow/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-snow/pkg-descr?revision=HEAD]] [[https://cran.r-project.org/web/packages/snow/]] |
| |- | | |- |
| |R-cran-som | | |R-cran-som |
| |Self-Organizing Map | | |Self-Organizing Map |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-som/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/som/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/R-cran-som/pkg-descr?revision=HEAD]] [[http://cran.r-project.org/web/packages/som/]] |
| |- | | |- |
| |R-cran-udunits2 | | |R-cran-udunits2 |
| |Udunits-2 Bindings for R | | |Udunits-2 Bindings for R |
− | |[[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/udunits2/]] | + | |[[https://cran.r-project.org/web/packages/udunits2/]] |
| |- | | |- |
| |SCIP | | |SCIP |
| |Solver for mixed integer, mixed integer nonlinear programming | | |Solver for mixed integer, mixed integer nonlinear programming |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/SCIP/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://scip.zib.de]] | + | |[[https://svnweb.freebsd.org/ports/head/math/SCIP/pkg-descr?revision=HEAD]] [[ttp://scip.zib.de]] |
| |- | | |- |
| |SimGrid | | |SimGrid |
| |Simulator of the behavior of large-scale distributed systems | | |Simulator of the behavior of large-scale distributed systems |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/simgrid/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://simgrid.org/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/simgrid/pkg-descr?revision=HEAD]] [[https://simgrid.org/]] |
| |- | | |- |
| |SoPlex | | |SoPlex |
| |Optimization package for solving linear programming problems (LPs) | | |Optimization package for solving linear programming problems (LPs) |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/SoPlex/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://soplex.zib.de]] | + | |[[https://svnweb.freebsd.org/ports/head/math/SoPlex/pkg-descr?revision=HEAD]] [[http://soplex.zib.de]] |
| |- | | |- |
| |abinit | | |abinit |
| |Full-featured atomic-scale first-principles simulation software | | |Full-featured atomic-scale first-principles simulation software |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/abinit/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.abinit.org]] | + | |[[https://svnweb.freebsd.org/ports/head/science/abinit/pkg-descr?revision=HEAD]] [[https://www.abinit.org]] |
| |- | | |- |
| |adios2 | | |adios2 |
| |Next generation of ADIOS developed in the Exascale Computing Program | | |Next generation of ADIOS developed in the Exascale Computing Program |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/misc/adios2/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/ornladios/ADIOS2]] | + | |[[https://svnweb.freebsd.org/ports/head/misc/adios2/pkg-descr?revision=HEAD]] [[https://github.com/ornladios/ADIOS2]] |
| |- | | |- |
| |afni | | |afni |
| |Advanced Functional Neuro Imaging | | |Advanced Functional Neuro Imaging |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/afni/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://afni.nimh.nih.gov/afni/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/afni/pkg-descr?revision=HEAD]] [[http://afni.nimh.nih.gov/afni/]] |
| |- | | |- |
| |agrum- | | |agrum- |
| |Graphical modeler for Bayesian networks, influence diagrams, etc | | |Graphical modeler for Bayesian networks, influence diagrams, etc |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/agrum/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://agrum.gitlab.io/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/agrum/pkg-descr?revision=HEAD]] [[https://agrum.gitlab.io/]] |
| |- | | |- |
| |atompaw | | |atompaw |
| |Tool for projector augmented wave functions for molecular simulations | | |Tool for projector augmented wave functions for molecular simulations |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/atompaw/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://users.wfu.edu/natalie/papers/pwpaw/]] | + | |[[https://svnweb.freebsd.org/ports/head/science/atompaw/pkg-descr?revision=HEAD]] [[http://users.wfu.edu/natalie/papers/pwpaw/]] |
| |- | | |- |
− | |brian | + | | |
− | |Clock-driven simulator for spiking neural networks
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/brian/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.briansimulator.org/]] | + | |
| |- | | |- |
− | |cdf3 | + | | |
− | |Device independent view of the CDF data model
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/cdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cdf.gsfc.nasa.gov/]] | + | |
− | | + | |
| |- | | |- |
− | |cgribex | + | | |
− | |Lightweight GRIBEX in C with portable Fortran interface
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/cgribex/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://code.mpimet.mpg.de/projects/cgribex]] | + | |
| |- | | |- |
− | |colt | + | | |
− | |Java package for scalable scientific and technical computing
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/colt/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://acs.lbl.gov/~hoschek/colt/]] | + | |
| |- | | |- |
− | |coordgenlibs | + | | |
− | |Schrodinger-developed 2D coordinate generation
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/coordgenlibs/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/schrodinger/coordgenlibs]] | + | |
− | | + | |
| |- | | |- |
− | |devisor | + | | |
− | |Design and Visualization Software Resource for FeatFlow
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/devisor/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.featflow.de/]] | + | |
| |- | | |- |
− | |dftbplus | + | | |
− | |DFTB+: Package for performing fast atomistic simulations
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dftbplus/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.dftbplus.org/]] | + | |
| |- | | |- |
− | |dkh | + | | |
− | |Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dkh/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.reiher.ethz.ch/software/dkh-x2c.html]] | + | |
| |- | | |- |
− | |dlib-cpp | + | | |
− | |Machine learning framework written in C++
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dlib-cpp/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://dlib.net]] | + | |
| |- | | |- |
− | |dvc | + | | |
− | |Git for data scientists: manage code and data together
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dvc/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://dvc.org/]] | + | |
| |- | | |- |
− | |erd | + | | |
− | |AcesIII electron repulsion integrals
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/erd/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/psi4/erd]] | + | |
| |- | | |- |
− | |fann | + | | |
− | |Free open source neural network library
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/fann/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://leenissen.dk/]] | + | |
− | | + | |
| |- | | |- |
− | |gnudatalanguage | + | | |
− | |GDL, a free IDL compatible incremental compiler
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gnudatalanguage/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/gnudatalanguage/gdl]] | + | |
| |- | | |- |
− | |grads | + | | |
− | |The Grid Analysis and Display System
| + | |[[]] [[]] |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/graphics/grads/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://grads.iges.org/grads/]] | + | |
− | |-
| + | |
− | |gsmc
| + | |
− | |Smith chart program for impedance matching
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gsmc/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.qsl.net/ik5nax]]
| + | |
− | |-
| + | |
− | |gtamsanalyzer
| + | |
− | |Qualitative Research Software for the Free World for GNUstep
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gtamsanalyzer/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://tamsys.sourceforge.net/gtams/]]
| + | |
− | |-
| + | |
− | |gwyddion
| + | |
− | |Gtk2 based SPM data visualization and analysis tool
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gwyddion/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://gwyddion.net/]]
| + | |
− | |-
| + | |
− | |h5utils
| + | |
− | |Set of utilities for visualization and conversion of HDF5 format
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/h5utils/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/stevengj/h5utils]]
| + | |
− | |-
| + | |
− | |h5z-zfp
| + | |
− | |Registered ZFP compression plugin for HDF5
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/h5z-zfp/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://h5z-zfp.readthedocs.io/en/latest/]]
| + | |
− | |-
| + | |
− | |harminv
| + | |
− | |Solver of harmonic inversion
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/harminv/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://ab-initio.mit.edu/wiki/index.php/Harminv]]
| + | |
− | |-
| + | |
− | |hdf
| + | |
− | |Hierarchical Data Format library (from NCSA)
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.hdfgroup.org/products/hdf4/]]
| + | |
− | |-
| + | |
− | |hdf-szip
| + | |
− | |Lossless compression library for scientific data
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/szip/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://support.hdfgroup.org/doc_resource/SZIP/]]
| + | |
− | |-
| + | |
− | |hdf5
| + | |
− | |Hierarchical Data Format library (from NCSA)
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hdf5/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.hdfgroup.org/]]
| + | |
− | |-
| + | |
− | |hdf5-18
| + | |
− | |Hierarchical Data Format library (from NCSA) 1.8
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hdf5-18/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.hdfgroup.org/HDF5/]]
| + | |
− | |-
| + | |
− | |healpix
| + | |
− | |Software for pixelization, visualization, etc of data on the sphere
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/healpix/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://healpix.jpl.nasa.gov/]]
| + | |
− | |-
| + | |
− | |hhsuite
| + | |
− | |Remote protein homology detection suite
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/biology/hhsuite/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/soedinglab/hh-suite]]
| + | |
− | |-
| + | |
− | |highfive
| + | |
− | |Header-only C++ HDF5 interface
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/highfive/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/BlueBrain/HighFive]]
| + | |
− | |-
| + | |
− | |hypre
| + | |
− | |Scalable Linear Solvers and Multigrid Methods
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hypre/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://computation.llnl.gov/projects/hypre-scalable-linear-solvers-multigrid-methods]]
| + | |
− | | + | |
− | |-
| + | |
− | |libaec
| + | |
− | |Adaptive entropy coding library
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libaec/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://gitlab.dkrz.de/k202009/libaec]]
| + | |
− | |-
| + | |
− | |libccp4
| + | |
− | |Protein X-ray crystallography toolkit
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libccp4/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.ccp4.ac.uk/]]
| + | |
− | |-
| + | |
− | |libgeodecomp
| + | |
− | |LibGeoDecomp is an auto-parallelizing library for computer simulations
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libgeodecomp/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.libgeodecomp.org/]]
| + | |
− | |-
| + | |
− | |libghemical
| + | |
− | |Support libraries of science/ghemical port
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libghemical/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.bioinformatics.org/ghemical/ghemical/index.html]]
| + | |
− | |-
| + | |
− | |libquantum
| + | |
− | |C library for quantum computing and quantum simulation
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libquantum/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.libquantum.de/]]
| + | |
− | |-
| + | |
− | |libsvm
| + | |
− | |Library for Support Vector Machines
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libsvm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.csie.ntu.edu.tw/~cjlin/libsvm/]]
| + | |
− | |-
| + | |
− | |libxc
| + | |
− | |Library of exchange-correlation functionals for DFT
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libxc/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.tddft.org/programs/libxc/]]
| + | |
− | |-
| + | |
− | |libxsmm
| + | |
− | |Library for dense and sparse matrix operations and deep learning
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/libxsmm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/hfp/libxsmm]]
| + | |
− | |-
| + | |
− | |madness
| + | |
− | |Multiresolution adaptive numeric environment for scientific simulation
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/madness/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/m-a-d-n-e-s-s/madness]]
| + | |
− | |-
| + | |
− | |mcstas
| + | |
− | |Monte Carlo neutron ray tracing package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcstas/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcstas.org]]
| + | |
− | |-
| + | |
− | |mcstas-comps
| + | |
− | |Component Library for the McStas neutron ray tracing package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcstas-comps/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcstas.org]]
| + | |
− | |-
| + | |
− | |mcxtrace
| + | |
− | |Monte Carlo X-ray tracing package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcxtrace/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcxtrace.org]]
| + | |
− | |-
| + | |
− | |mcxtrace-comps
| + | |
− | |Component Library for the McXtrace X-ray tracing package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcxtrace-comps/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcxtrace.org]]
| + | |
− | |-
| + | |
− | |mdynamix
| + | |
− | |General purpose molecular dynamics code
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mdynamix/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.fos.su.se/~sasha/mdynamix/]]
| + | |
− | |-
| + | |
− | |minc2
| + | |
− | |Medical Imaging NetCDF
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/minc2/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.bic.mni.mcgill.ca/ServicesSoftware/MINC]]
| + | |
− | |-
| + | |
− | |nifticlib
| + | |
− | |Neuroimaging Informatics Technology Initiative data format
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/nifticlib/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://nifti.nimh.nih.gov/]]
| + | |
− | |-
| + | |
− | |octopus
| + | |
− | |Scientific program aimed at the ab initio virtual experimentation
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/octopus/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://octopus-code.org/wiki/Main_Page]]
| + | |
− | |-
| + | |
− | |p5-Algorithm-SVMLight
| + | |
− | |Perl interface to SVMLight Machine-Learning Package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/p5-Algorithm-SVMLight/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://metacpan.org/release/Algorithm-SVMLight]]
| + | |
− | |-
| + | |
− | |p5-Geo-BUFR
| + | |
− | |Perl extension for handling of WMO BUFR files
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=ttps://svnweb.freebsd.org/ports/head/science/p5-Geo-BUFR/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://metacpan.org/release/Geo-BUFR]]
| + | |
− | | + | |
− | |-
| + | |
− | |p5-Mcstas-Tools
| + | |
− | |Perl based tools for the McStas neutron ray tracing package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/p5-Mcstas-Tools/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcstas.org]]
| + | |
− | |-
| + | |
− | |p5-Quantum-Superpositions
| + | |
− | |QM-like superpositions in Perl
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/lang/p5-Quantum-Superpositions/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://metacpan.org/release/Quantum-Superpositions]]
| + | |
− | |-
| + | |
− | |pagmo2
| + | |
− | |Platform to perform parallel computations of optimization tasks
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pagmo2/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/esa/pagmo2]]
| + | |
− | |-
| + | |
− | |paraview
| + | |
− | |Powerful scientific data visualization application
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/paraview/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.paraview.org/]]
| + | |
− | |-
| + | |
− | |parmgridgen
| + | |
− | |Library for obtaining a sequence of successive coarse grids
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/parmgridgen/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mgnet.org/mgnet-codes-parmgridgen.html]]
| + | |
− | |-
| + | |
− | |plinkseq
| + | |
− | |Toolset for working with human genetic variation data
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/biology/plinkseq/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://atgu.mgh.harvard.edu/plinkseq/]]
| + | |
− | |-
| + | |
− | |plplot
| + | |
− | |Scientific plotting package
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/plplot/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://plplot.sourceforge.net/]]
| + | |
− | |-
| + | |
− | |pnetcdf
| + | |
− | |Library providing high-performance I/O
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pnetcdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://trac.mcs.anl.gov/projects/parallel-netcdf]]
| + | |
− | |-
| + | |
− | |praat
| + | |
− | |Phonetics by Computer
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/audio/praat/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.praat.org]]
| + | |
− | |-
| + | |
− | |psychopy
| + | |
− | |Psychophysics toolkit for Python
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/psychopy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.psychopy.org/]]
| + | |
− | |-
| + | |
− | |pulseview
| + | |
− | |GUI client that supports various hardware logic analyzers
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pulseview/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sigrok.org/]]
| + | |
− | |-
| + | |
− | |py27-DendroPy
| + | |
− | |Phylogenetic computing library
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-DendroPy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://packages.python.org/DendroPy/]]
| + | |
− | |-
| + | |
− | |py27-GPy
| + | |
− | |Gaussian process toolbox
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-GPy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sheffieldml.github.io/GPy/]]
| + | |
− | |-
| + | |
− | |py27-GPyOpt
| + | |
− | |Bayesian optimization toolbox based on GPy
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-GPyOpt/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sheffieldml.github.io/GPyOpt/]]
| + | |
− | |-
| + | |
− | |py27-OpenFermion
| + | |
− | |Electronic structure package for quantum computers
| + | |
− | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-OpenFermion/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/quantumlib/OpenFermion]]
| + | |
| |- | | |- |
| !colspan="3"| | | !colspan="3"| |
| |- | | |- |
− | !colspan="3"|'''If you don't find a package, you are looking for, <br/>we recommend to search the ''' [[File:Icon FreeBSD.png|50px|link=https://www.freebsd.org/ports/science.html]]'''Category Science in tne Ports Collection.''' | + | !colspan="3"|'''If you don't find a package, you are looking for, <br/>we recommend to search the ''' [[File:Icon FreeBSD.png|50px|link=https://www.freebsd.org/ports/categories-grouped.html]]'''Ports Collection.''' |
| |- | | |- |
| !colspan="3"| | | !colspan="3"| |
| |- | | |- |
− | !colspan="3"|'''Back to ''' [[image:Icon Disti GhostBSD.png|50px|link=Science and Engineering]] '''Science and Engineering''' | + | !colspan="3"|'''Back to the''' [[image:Icon Disti GhostBSD.png|50px|link=Office Applications]]'''Office Applications''' |
| + | |
| |} | | |} |
| | | |
| | | |
| [[Category:Station]] | | [[Category:Station]] |