Difference between revisions of "Science"
From GhostBSD Wiki
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|paraview | |paraview | ||
|Powerful scientific data visualization application | |Powerful scientific data visualization application | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/paraview/pkg-descr?revision=HEAD]] [[http://www.paraview.org/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/paraview/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.paraview.org/]] |
|- | |- | ||
|parmgridgen | |parmgridgen | ||
|Library for obtaining a sequence of successive coarse grids | |Library for obtaining a sequence of successive coarse grids | ||
| − | |[[https://svnweb.freebsd.org/ports/head/math/parmgridgen/pkg-descr?revision=HEAD]] [[http://www.mgnet.org/mgnet-codes-parmgridgen.html]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/parmgridgen/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mgnet.org/mgnet-codes-parmgridgen.html]] |
|- | |- | ||
|plinkseq | |plinkseq | ||
|Toolset for working with human genetic variation data | |Toolset for working with human genetic variation data | ||
| − | |[[https://svnweb.freebsd.org/ports/head/biology/plinkseq/pkg-descr?revision=HEAD]] [[http://atgu.mgh.harvard.edu/plinkseq/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/biology/plinkseq/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://atgu.mgh.harvard.edu/plinkseq/]] |
|- | |- | ||
|plplot | |plplot | ||
|Scientific plotting package | |Scientific plotting package | ||
| − | |[[https://svnweb.freebsd.org/ports/head/math/plplot/pkg-descr?revision=HEAD]] [[http://plplot.sourceforge.net/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/plplot/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://plplot.sourceforge.net/]] |
|- | |- | ||
|pnetcdf | |pnetcdf | ||
|Library providing high-performance I/O | |Library providing high-performance I/O | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/pnetcdf/pkg-descr?revision=HEAD]] [[https://trac.mcs.anl.gov/projects/parallel-netcdf]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pnetcdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://trac.mcs.anl.gov/projects/parallel-netcdf]] |
|- | |- | ||
|praat | |praat | ||
|Phonetics by Computer | |Phonetics by Computer | ||
| − | |[[https://svnweb.freebsd.org/ports/head/audio/praat/pkg-descr?revision=HEAD]] [[http://www.praat.org]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/audio/praat/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.praat.org]] |
|- | |- | ||
|psychopy | |psychopy | ||
|Psychophysics toolkit for Python | |Psychophysics toolkit for Python | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/psychopy/pkg-descr?revision=HEAD]] [[http://www.psychopy.org/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/psychopy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.psychopy.org/]] |
|- | |- | ||
|pulseview | |pulseview | ||
|GUI client that supports various hardware logic analyzers | |GUI client that supports various hardware logic analyzers | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/pulseview/pkg-descr?revision=HEAD]] [[https://sigrok.org/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pulseview/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sigrok.org/]] |
|- | |- | ||
|py27-DendroPy | |py27-DendroPy | ||
|Phylogenetic computing library | |Phylogenetic computing library | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/py-DendroPy/pkg-descr?revision=HEAD]] [[http://packages.python.org/DendroPy/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-DendroPy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://packages.python.org/DendroPy/]] |
|- | |- | ||
|py27-GPy | |py27-GPy | ||
|Gaussian process toolbox | |Gaussian process toolbox | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/py-GPy/pkg-descr?revision=HEAD]] [[https://sheffieldml.github.io/GPy/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-GPy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sheffieldml.github.io/GPy/]] |
|- | |- | ||
|py27-GPyOpt | |py27-GPyOpt | ||
|Bayesian optimization toolbox based on GPy | |Bayesian optimization toolbox based on GPy | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/py-GPyOpt/pkg-descr?revision=HEAD]] [[https://sheffieldml.github.io/GPyOpt/]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-GPyOpt/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sheffieldml.github.io/GPyOpt/]] |
|- | |- | ||
|py27-OpenFermion | |py27-OpenFermion | ||
|Electronic structure package for quantum computers | |Electronic structure package for quantum computers | ||
| − | |[[https://svnweb.freebsd.org/ports/head/science/py-OpenFermion/pkg-descr?revision=HEAD]] [[https://github.com/quantumlib/OpenFermion]] | + | |[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-OpenFermion/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/quantumlib/OpenFermion]] |
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!colspan="3"| | !colspan="3"| | ||
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| − | !colspan="3"|'''If you don't find a package, you are looking for, <br/>we recommend to search the ''' [[File:Icon FreeBSD.png|50px|link=https://www.freebsd.org/ports/ | + | !colspan="3"|'''If you don't find a package, you are looking for, <br/>we recommend to search the ''' [[File:Icon FreeBSD.png|50px|link=https://www.freebsd.org/ports/science.html]]'''Category Science in tne Ports Collection.''' |
|- | |- | ||
!colspan="3"| | !colspan="3"| | ||
Revision as of 12:59, 20 January 2020
Welcome to the Science
|
| App/Package | Abstract | Addition or Link |
|---|---|---|
| For scanning please look here. | ||
| InsightToolkit | Insight Toolkit |  
|
| OpenSim-core | Software for modeling of musculoskeletal structures |
|
| R-cran-AMORE | MORE flexible neural network package |
|
| R-cran-DCluster | Functions for the detection of spatial clusters of diseases |
|
| R-cran-Epi | Package for statistical analysis in epidemiology |
|
| R-cran-bayesm | Bayesian Inference for Marketing/Micro-econometrics |
|
| R-cran-cmprsk | Subdistribution Analysis of Competing Risks |
|
| R-cran-e1071 | Misc Functions of the Department of Statistics (e1071), TU Wien |
|
| R-cran-eco | R Package for Ecological Inference in 2x2 Tables |
|
| R-cran-epicalc | Epidemiological calculator |
|
| R-cran-etm | Empirical Transition Matrix |
|
| R-cran-fastICA | FastICA Algorithms to Perform ICA and Projection Pursuit |
|
| R-cran-kernlab | Kernel-Based Machine Learning Lab |
|
| R-cran-psych | Psych package for the R project |
|
| R-cran-snow | Support for simple parallel computing in R |
|
| R-cran-som | Self-Organizing Map |
|
| R-cran-udunits2 | Udunits-2 Bindings for R |
|
| SCIP | Solver for mixed integer, mixed integer nonlinear programming |
|
| SimGrid | Simulator of the behavior of large-scale distributed systems |
|
| SoPlex | Optimization package for solving linear programming problems (LPs) |
|
| abinit | Full-featured atomic-scale first-principles simulation software |
|
| adios2 | Next generation of ADIOS developed in the Exascale Computing Program |
|
| afni | Advanced Functional Neuro Imaging |
|
| agrum- | Graphical modeler for Bayesian networks, influence diagrams, etc |
|
| atompaw | Tool for projector augmented wave functions for molecular simulations |
|
| brian | Clock-driven simulator for spiking neural networks |
|
| cdcl | Scientific graphic library for geoscience |
|
| cdf3 | Device independent view of the CDF data model |
|
| cdo | Climate Data Operators |
|
| cgribex | Lightweight GRIBEX in C with portable Fortran interface |
|
| colt | Java package for scalable scientific and technical computing |
|
| coordgenlibs | Schrodinger-developed 2D coordinate generation |
|
| dcl | Scientific graphic library for geoscience |
|
| devisor | Design and Visualization Software Resource for FeatFlow |
|
| dftbplus | DFTB+: Package for performing fast atomistic simulations |
|
| dkh | Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction |
|
| dlib-cpp | Machine learning framework written in C++ |
|
| dvc | Git for data scientists: manage code and data together |
|
| erd | AcesIII electron repulsion integrals |
|
| fann | Free open source neural network library |
|
| fvcom | Unstructured Grid Finite Volume Coastal Ocean Model |
|
| fvcom-openmpi | Unstructured Grid Finite Volume Coastal Ocean Model |
|
| gnudatalanguage | GDL, a free IDL compatible incremental compiler |
|
| grads | The Grid Analysis and Display System |
|
| gsmc | Smith chart program for impedance matching |
|
| gtamsanalyzer | Qualitative Research Software for the Free World for GNUstep |
|
| gwyddion | Gtk2 based SPM data visualization and analysis tool |
|
| h5utils | Set of utilities for visualization and conversion of HDF5 format |
|
| h5z-zfp | Registered ZFP compression plugin for HDF5 |
|
| harminv | Solver of harmonic inversion |
|
| hdf | Hierarchical Data Format library (from NCSA) |
|
| hdf-szip | Lossless compression library for scientific data |
|
| hdf5 | Hierarchical Data Format library (from NCSA) |
|
| hdf5-18 | Hierarchical Data Format library (from NCSA) 1.8 |
|
| healpix | Software for pixelization, visualization, etc of data on the sphere |
|
| hhsuite | Remote protein homology detection suite |
|
| highfive | Header-only C++ HDF5 interface |
|
| hypre | Scalable Linear Solvers and Multigrid Methods |
|
| jstrack | Freeware hurricane tracking program |
|
| libaec | Adaptive entropy coding library |
|
| libccp4 | Protein X-ray crystallography toolkit |
|
| libgeodecomp | LibGeoDecomp is an auto-parallelizing library for computer simulations |
|
| libghemical | Support libraries of science/ghemical port |
|
| libquantum | C library for quantum computing and quantum simulation |
|
| libsvm | Library for Support Vector Machines |
|
| libxc | Library of exchange-correlation functionals for DFT |
|
| libxsmm | Library for dense and sparse matrix operations and deep learning |
|
| madness | Multiresolution adaptive numeric environment for scientific simulation |
|
| mcstas | Monte Carlo neutron ray tracing package |
|
| mcstas-comps | Component Library for the McStas neutron ray tracing package |
|
| mcxtrace | Monte Carlo X-ray tracing package |
|
| mcxtrace-comps | Component Library for the McXtrace X-ray tracing package |
|
| mdynamix | General purpose molecular dynamics code |
|
| minc2 | Medical Imaging NetCDF |
|
| nifticlib | Neuroimaging Informatics Technology Initiative data format |
|
| octopus | Scientific program aimed at the ab initio virtual experimentation |
|
| p5-Algorithm-SVMLight | Perl interface to SVMLight Machine-Learning Package |
|
| p5-Geo-BUFR | Perl extension for handling of WMO BUFR files |
|
| p5-Geo-Coordinates-Converter | Simple converter of geo coordinates |
|
| p5-Geo-Coordinates-Converter-iArea | Some utility functions around iArea, utilities for DoCoMo iArea. |
|
| p5-Geo-ReadGRIB | Perl module provides read access to GRIB files |
|
| p5-Geo-WebService-Elevation-USGS | Perl extension for elevation queries against USGS web services |
|
| p5-Mcstas-Tools | Perl based tools for the McStas neutron ray tracing package |
|
| p5-Quantum-Superpositions | QM-like superpositions in Perl |
|
| pagmo2 | Platform to perform parallel computations of optimization tasks |
|
| paraview | Powerful scientific data visualization application |
|
| parmgridgen | Library for obtaining a sequence of successive coarse grids |
|
| plinkseq | Toolset for working with human genetic variation data |
|
| plplot | Scientific plotting package |
|
| pnetcdf | Library providing high-performance I/O |
|
| praat | Phonetics by Computer |
|
| psychopy | Psychophysics toolkit for Python |
|
| pulseview | GUI client that supports various hardware logic analyzers |
|
| py27-DendroPy | Phylogenetic computing library |
|
| py27-GPy | Gaussian process toolbox |
|
| py27-GPyOpt | Bayesian optimization toolbox based on GPy |
|
| py27-OpenFermion | Electronic structure package for quantum computers |
|
| If you don't find a package, you are looking for, we recommend to search the  Category Science in tne Ports Collection.
| ||
Back to the  Office Applications
| ||
