Difference between revisions of "Science"

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!colspan="3"|'''Back to the''' [[image:Icon Disti GhostBSD.png|50px|link=Office Applications]]'''Office Applications'''
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!colspan="3"|For scanning [[Scanning|please look here.]]
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|-
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!colspan="3"|
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|-
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|InsightToolkit
 +
|Insight Toolkit
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/InsightToolkit/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.itk.org]]
 +
|-
 +
|OpenSim-core
 +
|Software for modeling of musculoskeletal structures
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/opensim-core/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://opensim.stanford.edu/]]
 +
|-
 +
|R-cran-AMORE
 +
|MORE flexible neural network package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-AMORE/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://rwiki.sciviews.org/doku.php?id=packages:cran:amore]]
 +
|-
 +
|R-cran-DCluster
 +
|Functions for the detection of spatial clusters of diseases
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-DCluster/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/DCluster/]]
 +
|-
 +
|R-cran-Epi
 +
|Package for statistical analysis in epidemiology
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-Epi/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/Epi/]]
 +
|-
 +
|R-cran-bayesm
 +
|Bayesian Inference for Marketing/Micro-econometrics
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-bayesm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.perossi.org/home/bsm-1]]
 +
|-
 +
|R-cran-cmprsk
 +
|Subdistribution Analysis of Competing Risks
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-cmprsk/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/cmprsk/]]
 +
|-
 +
|R-cran-e1071
 +
|Misc Functions of the Department of Statistics (e1071), TU Wien
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-e1071/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/e1071/]]
 +
|-
 +
|R-cran-eco
 +
|R Package for Ecological Inference in 2x2 Tables
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-eco/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://imai.princeton.edu/software/eco.html]]
 +
|-
 +
|R-cran-epicalc
 +
|Epidemiological calculator
 +
|[[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/epicalc/]]
 +
|-
 +
|R-cran-etm
 +
|Empirical Transition Matrix
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-etm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/etm/]]
 +
|-
 +
|R-cran-fastICA
 +
|FastICA Algorithms to Perform ICA and Projection Pursuit
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-fastICA/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://CRAN.R-project.org/package=fastICA]]
 +
|-
 +
|R-cran-kernlab
 +
|Kernel-Based Machine Learning Lab
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-kernlab/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/kernlab/]]
 +
|-
 +
|R-cran-psych
 +
|Psych package for the R project
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/R-cran-psych/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/psych/index.html]]
 +
|-
 +
|R-cran-snow
 +
|Support for simple parallel computing in R
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-snow/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/snow/]]
 +
|-
 +
|R-cran-som
 +
|Self-Organizing Map
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/R-cran-som/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://cran.r-project.org/web/packages/som/]]
 +
|-
 +
|R-cran-udunits2
 +
|Udunits-2 Bindings for R
 +
|[[File:1329059652.png|35px|link=https://cran.r-project.org/web/packages/udunits2/]]
 +
|-
 +
|SCIP
 +
|Solver for mixed integer, mixed integer nonlinear programming
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/SCIP/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://scip.zib.de]]
 +
|-
 +
|SimGrid
 +
|Simulator of the behavior of large-scale distributed systems
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/simgrid/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://simgrid.org/]]
 +
|-
 +
|SoPlex
 +
|Optimization package for solving linear programming problems (LPs)
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/SoPlex/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://soplex.zib.de]]
 +
|-
 +
|abinit
 +
|Full-featured atomic-scale first-principles simulation software
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/abinit/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.abinit.org]]
 +
|-
 +
|adios2
 +
|Next generation of ADIOS developed in the Exascale Computing Program
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/misc/adios2/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/ornladios/ADIOS2]]
 +
|-
 +
|afni
 +
|Advanced Functional Neuro Imaging
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/afni/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://afni.nimh.nih.gov/afni/]]
 +
|-
 +
|agrum-
 +
|Graphical modeler for Bayesian networks, influence diagrams, etc
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/agrum/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://agrum.gitlab.io/]]
 +
|-
 +
|atompaw
 +
|Tool for projector augmented wave functions for molecular simulations
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/atompaw/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://users.wfu.edu/natalie/papers/pwpaw/]]
 +
|-
 +
|brian
 +
|Clock-driven simulator for spiking neural networks
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/brian/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.briansimulator.org/]]
 +
|-
 +
|cdf3
 +
|Device independent view of the CDF data model
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/cdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://cdf.gsfc.nasa.gov/]]
  
 +
|-
 +
|cgribex
 +
|Lightweight GRIBEX in C with portable Fortran interface
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/cgribex/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://code.mpimet.mpg.de/projects/cgribex]]
 +
|-
 +
|colt
 +
|Java package for scalable scientific and technical computing
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/colt/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://acs.lbl.gov/~hoschek/colt/]]
 +
|-
 +
|coordgenlibs
 +
|Schrodinger-developed 2D coordinate generation
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/coordgenlibs/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/schrodinger/coordgenlibs]]
 +
 +
|-
 +
|devisor
 +
|Design and Visualization Software Resource for FeatFlow
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/devisor/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.featflow.de/]]
 +
|-
 +
|dftbplus
 +
|DFTB+: Package for performing fast atomistic simulations
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dftbplus/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.dftbplus.org/]]
 +
|-
 +
|dkh
 +
|Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dkh/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.reiher.ethz.ch/software/dkh-x2c.html]]
 +
|-
 +
|dlib-cpp
 +
|Machine learning framework written in C++
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dlib-cpp/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://dlib.net]]
 +
|-
 +
|dvc
 +
|Git for data scientists: manage code and data together
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/dvc/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://dvc.org/]]
 +
|-
 +
|erd
 +
|AcesIII electron repulsion integrals
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/erd/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/psi4/erd]]
 +
|-
 +
|fann
 +
|Free open source neural network library
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/fann/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://leenissen.dk/]]
 +
 +
|-
 +
|gnudatalanguage
 +
|GDL, a free IDL compatible incremental compiler
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gnudatalanguage/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/gnudatalanguage/gdl]]
 +
|-
 +
|grads
 +
|The Grid Analysis and Display System
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/graphics/grads/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://grads.iges.org/grads/]]
 +
|-
 +
|gsmc
 +
|Smith chart program for impedance matching
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gsmc/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.qsl.net/ik5nax]]
 +
|-
 +
|gtamsanalyzer
 +
|Qualitative Research Software for the Free World for GNUstep
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gtamsanalyzer/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://tamsys.sourceforge.net/gtams/]]
 +
|-
 +
|gwyddion
 +
|Gtk2 based SPM data visualization and analysis tool
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/gwyddion/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://gwyddion.net/]]
 +
|-
 +
|h5utils
 +
|Set of utilities for visualization and conversion of HDF5 format
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/h5utils/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/stevengj/h5utils]]
 +
|-
 +
|h5z-zfp
 +
|Registered ZFP compression plugin for HDF5
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/h5z-zfp/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://h5z-zfp.readthedocs.io/en/latest/]]
 +
|-
 +
|harminv
 +
|Solver of harmonic inversion
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/harminv/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://ab-initio.mit.edu/wiki/index.php/Harminv]]
 +
|-
 +
|hdf
 +
|Hierarchical Data Format library (from NCSA)
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.hdfgroup.org/products/hdf4/]]
 +
|-
 +
|hdf-szip
 +
|Lossless compression library for scientific data
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/szip/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://support.hdfgroup.org/doc_resource/SZIP/]]
 +
|-
 +
|hdf5
 +
|Hierarchical Data Format library (from NCSA)
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hdf5/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.hdfgroup.org/]]
 +
|-
 +
|hdf5-18
 +
|Hierarchical Data Format library (from NCSA) 1.8
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hdf5-18/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.hdfgroup.org/HDF5/]]
 +
|-
 +
|healpix
 +
|Software for pixelization, visualization, etc of data on the sphere
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/healpix/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://healpix.jpl.nasa.gov/]]
 +
|-
 +
|hhsuite
 +
|Remote protein homology detection suite
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/biology/hhsuite/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/soedinglab/hh-suite]]
 +
|-
 +
|highfive
 +
|Header-only C++ HDF5 interface
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/highfive/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/BlueBrain/HighFive]]
 +
|-
 +
|hypre
 +
|Scalable Linear Solvers and Multigrid Methods
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/hypre/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://computation.llnl.gov/projects/hypre-scalable-linear-solvers-multigrid-methods]]
 +
 +
|-
 +
|libaec
 +
|Adaptive entropy coding library
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libaec/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://gitlab.dkrz.de/k202009/libaec]]
 +
|-
 +
|libccp4
 +
|Protein X-ray crystallography toolkit
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libccp4/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.ccp4.ac.uk/]]
 +
|-
 +
|libgeodecomp
 +
|LibGeoDecomp is an auto-parallelizing library for computer simulations
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libgeodecomp/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.libgeodecomp.org/]]
 +
|-
 +
|libghemical
 +
|Support libraries of science/ghemical port
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libghemical/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://www.bioinformatics.org/ghemical/ghemical/index.html]]
 +
|-
 +
|libquantum
 +
|C library for quantum computing and quantum simulation
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libquantum/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.libquantum.de/]]
 +
|-
 +
|libsvm
 +
|Library for Support Vector Machines
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libsvm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.csie.ntu.edu.tw/~cjlin/libsvm/]]
 +
|-
 +
|libxc
 +
|Library of exchange-correlation functionals for DFT
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/libxc/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.tddft.org/programs/libxc/]]
 +
|-
 +
|libxsmm
 +
|Library for dense and sparse matrix operations and deep learning
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/libxsmm/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/hfp/libxsmm]]
 +
|-
 +
|madness
 +
|Multiresolution adaptive numeric environment for scientific simulation
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/madness/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/m-a-d-n-e-s-s/madness]]
 +
|-
 +
|mcstas
 +
|Monte Carlo neutron ray tracing package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcstas/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcstas.org]]
 +
|-
 +
|mcstas-comps
 +
|Component Library for the McStas neutron ray tracing package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcstas-comps/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcstas.org]]
 +
|-
 +
|mcxtrace
 +
|Monte Carlo X-ray tracing package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcxtrace/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcxtrace.org]]
 +
|-
 +
|mcxtrace-comps
 +
|Component Library for the McXtrace X-ray tracing package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mcxtrace-comps/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcxtrace.org]]
 +
|-
 +
|mdynamix
 +
|General purpose molecular dynamics code
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/mdynamix/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.fos.su.se/~sasha/mdynamix/]]
 +
|-
 +
|minc2
 +
|Medical Imaging NetCDF
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/minc2/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.bic.mni.mcgill.ca/ServicesSoftware/MINC]]
 +
|-
 +
|nifticlib
 +
|Neuroimaging Informatics Technology Initiative data format
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/nifticlib/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://nifti.nimh.nih.gov/]]
 +
|-
 +
|octopus
 +
|Scientific program aimed at the ab initio virtual experimentation
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/octopus/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://octopus-code.org/wiki/Main_Page]]
 +
|-
 +
|p5-Algorithm-SVMLight
 +
|Perl interface to SVMLight Machine-Learning Package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/p5-Algorithm-SVMLight/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://metacpan.org/release/Algorithm-SVMLight]]
 +
|-
 +
|p5-Geo-BUFR
 +
|Perl extension for handling of WMO BUFR files
 +
|[[File:Icon FreeBSD.png|100px|link=ttps://svnweb.freebsd.org/ports/head/science/p5-Geo-BUFR/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://metacpan.org/release/Geo-BUFR]]
 +
 +
|-
 +
|p5-Mcstas-Tools
 +
|Perl based tools for the McStas neutron ray tracing package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/p5-Mcstas-Tools/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mcstas.org]]
 +
|-
 +
|p5-Quantum-Superpositions
 +
|QM-like superpositions in Perl
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/lang/p5-Quantum-Superpositions/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://metacpan.org/release/Quantum-Superpositions]]
 +
|-
 +
|pagmo2
 +
|Platform to perform parallel computations of optimization tasks
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pagmo2/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/esa/pagmo2]]
 +
|-
 +
|paraview
 +
|Powerful scientific data visualization application
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/paraview/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.paraview.org/]]
 +
|-
 +
|parmgridgen
 +
|Library for obtaining a sequence of successive coarse grids
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/parmgridgen/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.mgnet.org/mgnet-codes-parmgridgen.html]]
 +
|-
 +
|plinkseq
 +
|Toolset for working with human genetic variation data
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/biology/plinkseq/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://atgu.mgh.harvard.edu/plinkseq/]]
 +
|-
 +
|plplot
 +
|Scientific plotting package
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/math/plplot/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://plplot.sourceforge.net/]]
 +
|-
 +
|pnetcdf
 +
|Library providing high-performance I/O
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pnetcdf/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://trac.mcs.anl.gov/projects/parallel-netcdf]]
 +
|-
 +
|praat
 +
|Phonetics by Computer
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/audio/praat/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.praat.org]]
 +
|-
 +
|psychopy
 +
|Psychophysics toolkit for Python
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/psychopy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://www.psychopy.org/]]
 +
|-
 +
|pulseview
 +
|GUI client that supports various hardware logic analyzers
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/pulseview/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sigrok.org/]]
 +
|-
 +
|py27-DendroPy
 +
|Phylogenetic computing library
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-DendroPy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=http://packages.python.org/DendroPy/]]
 +
|-
 +
|py27-GPy
 +
|Gaussian process toolbox
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-GPy/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sheffieldml.github.io/GPy/]]
 +
|-
 +
|py27-GPyOpt
 +
|Bayesian optimization toolbox based on GPy
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-GPyOpt/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://sheffieldml.github.io/GPyOpt/]]
 +
|-
 +
|py27-OpenFermion
 +
|Electronic structure package for quantum computers
 +
|[[File:Icon FreeBSD.png|100px|link=https://svnweb.freebsd.org/ports/head/science/py-OpenFermion/pkg-descr?revision=HEAD]] [[File:1329059652.png|35px|link=https://github.com/quantumlib/OpenFermion]] 
 +
|-
 +
!colspan="3"|
 +
|-
 +
!colspan="3"|'''If you don't find a package, you are looking for, <br/>we recommend to search the ''' [[File:Icon FreeBSD.png|50px|link=https://www.freebsd.org/ports/science.html]]'''Category Science in tne Ports Collection.'''
 +
|-
 +
!colspan="3"|
 +
|-
 +
!colspan="3"|'''Back to ''' [[image:Icon Disti GhostBSD.png|50px|link=Science and Engineering]] '''Science and Engineering'''
 
|}
 
|}
  
  
 
[[Category:Station]]
 
[[Category:Station]]

Latest revision as of 12:47, 22 January 2020

Welcome to theIcon Disti GhostBSD.png Science
App/Package Abstract Addition or Link
For scanning please look here.
InsightToolkit Insight Toolkit Icon FreeBSD.png 1329059652.png
OpenSim-core Software for modeling of musculoskeletal structures Icon FreeBSD.png 1329059652.png
R-cran-AMORE MORE flexible neural network package Icon FreeBSD.png 1329059652.png
R-cran-DCluster Functions for the detection of spatial clusters of diseases Icon FreeBSD.png 1329059652.png
R-cran-Epi Package for statistical analysis in epidemiology Icon FreeBSD.png 1329059652.png
R-cran-bayesm Bayesian Inference for Marketing/Micro-econometrics Icon FreeBSD.png 1329059652.png
R-cran-cmprsk Subdistribution Analysis of Competing Risks Icon FreeBSD.png 1329059652.png
R-cran-e1071 Misc Functions of the Department of Statistics (e1071), TU Wien Icon FreeBSD.png 1329059652.png
R-cran-eco R Package for Ecological Inference in 2x2 Tables Icon FreeBSD.png 1329059652.png
R-cran-epicalc Epidemiological calculator 1329059652.png
R-cran-etm Empirical Transition Matrix Icon FreeBSD.png 1329059652.png
R-cran-fastICA FastICA Algorithms to Perform ICA and Projection Pursuit Icon FreeBSD.png 1329059652.png
R-cran-kernlab Kernel-Based Machine Learning Lab Icon FreeBSD.png 1329059652.png
R-cran-psych Psych package for the R project Icon FreeBSD.png 1329059652.png
R-cran-snow Support for simple parallel computing in R Icon FreeBSD.png 1329059652.png
R-cran-som Self-Organizing Map Icon FreeBSD.png 1329059652.png
R-cran-udunits2 Udunits-2 Bindings for R 1329059652.png
SCIP Solver for mixed integer, mixed integer nonlinear programming Icon FreeBSD.png 1329059652.png
SimGrid Simulator of the behavior of large-scale distributed systems Icon FreeBSD.png 1329059652.png
SoPlex Optimization package for solving linear programming problems (LPs) Icon FreeBSD.png 1329059652.png
abinit Full-featured atomic-scale first-principles simulation software Icon FreeBSD.png 1329059652.png
adios2 Next generation of ADIOS developed in the Exascale Computing Program Icon FreeBSD.png 1329059652.png
afni Advanced Functional Neuro Imaging Icon FreeBSD.png 1329059652.png
agrum- Graphical modeler for Bayesian networks, influence diagrams, etc Icon FreeBSD.png 1329059652.png
atompaw Tool for projector augmented wave functions for molecular simulations Icon FreeBSD.png 1329059652.png
brian Clock-driven simulator for spiking neural networks Icon FreeBSD.png 1329059652.png
cdf3 Device independent view of the CDF data model Icon FreeBSD.png 1329059652.png
cgribex Lightweight GRIBEX in C with portable Fortran interface Icon FreeBSD.png 1329059652.png
colt Java package for scalable scientific and technical computing Icon FreeBSD.png 1329059652.png
coordgenlibs Schrodinger-developed 2D coordinate generation Icon FreeBSD.png 1329059652.png
devisor Design and Visualization Software Resource for FeatFlow Icon FreeBSD.png 1329059652.png
dftbplus DFTB+: Package for performing fast atomistic simulations Icon FreeBSD.png 1329059652.png
dkh Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction Icon FreeBSD.png 1329059652.png
dlib-cpp Machine learning framework written in C++ Icon FreeBSD.png 1329059652.png
dvc Git for data scientists: manage code and data together Icon FreeBSD.png 1329059652.png
erd AcesIII electron repulsion integrals Icon FreeBSD.png 1329059652.png
fann Free open source neural network library Icon FreeBSD.png 1329059652.png
gnudatalanguage GDL, a free IDL compatible incremental compiler Icon FreeBSD.png 1329059652.png
grads The Grid Analysis and Display System Icon FreeBSD.png 1329059652.png
gsmc Smith chart program for impedance matching Icon FreeBSD.png 1329059652.png
gtamsanalyzer Qualitative Research Software for the Free World for GNUstep Icon FreeBSD.png 1329059652.png
gwyddion Gtk2 based SPM data visualization and analysis tool Icon FreeBSD.png 1329059652.png
h5utils Set of utilities for visualization and conversion of HDF5 format Icon FreeBSD.png 1329059652.png
h5z-zfp Registered ZFP compression plugin for HDF5 Icon FreeBSD.png 1329059652.png
harminv Solver of harmonic inversion Icon FreeBSD.png 1329059652.png
hdf Hierarchical Data Format library (from NCSA) Icon FreeBSD.png 1329059652.png
hdf-szip Lossless compression library for scientific data Icon FreeBSD.png 1329059652.png
hdf5 Hierarchical Data Format library (from NCSA) Icon FreeBSD.png 1329059652.png
hdf5-18 Hierarchical Data Format library (from NCSA) 1.8 Icon FreeBSD.png 1329059652.png
healpix Software for pixelization, visualization, etc of data on the sphere Icon FreeBSD.png 1329059652.png
hhsuite Remote protein homology detection suite Icon FreeBSD.png 1329059652.png
highfive Header-only C++ HDF5 interface Icon FreeBSD.png 1329059652.png
hypre Scalable Linear Solvers and Multigrid Methods Icon FreeBSD.png 1329059652.png
libaec Adaptive entropy coding library Icon FreeBSD.png 1329059652.png
libccp4 Protein X-ray crystallography toolkit Icon FreeBSD.png 1329059652.png
libgeodecomp LibGeoDecomp is an auto-parallelizing library for computer simulations Icon FreeBSD.png 1329059652.png
libghemical Support libraries of science/ghemical port Icon FreeBSD.png 1329059652.png
libquantum C library for quantum computing and quantum simulation Icon FreeBSD.png 1329059652.png
libsvm Library for Support Vector Machines Icon FreeBSD.png 1329059652.png
libxc Library of exchange-correlation functionals for DFT Icon FreeBSD.png 1329059652.png
libxsmm Library for dense and sparse matrix operations and deep learning Icon FreeBSD.png 1329059652.png
madness Multiresolution adaptive numeric environment for scientific simulation Icon FreeBSD.png 1329059652.png
mcstas Monte Carlo neutron ray tracing package Icon FreeBSD.png 1329059652.png
mcstas-comps Component Library for the McStas neutron ray tracing package Icon FreeBSD.png 1329059652.png
mcxtrace Monte Carlo X-ray tracing package Icon FreeBSD.png 1329059652.png
mcxtrace-comps Component Library for the McXtrace X-ray tracing package Icon FreeBSD.png 1329059652.png
mdynamix General purpose molecular dynamics code Icon FreeBSD.png 1329059652.png
minc2 Medical Imaging NetCDF Icon FreeBSD.png 1329059652.png
nifticlib Neuroimaging Informatics Technology Initiative data format Icon FreeBSD.png 1329059652.png
octopus Scientific program aimed at the ab initio virtual experimentation Icon FreeBSD.png 1329059652.png
p5-Algorithm-SVMLight Perl interface to SVMLight Machine-Learning Package Icon FreeBSD.png 1329059652.png
p5-Geo-BUFR Perl extension for handling of WMO BUFR files Icon FreeBSD.png 1329059652.png
p5-Mcstas-Tools Perl based tools for the McStas neutron ray tracing package Icon FreeBSD.png 1329059652.png
p5-Quantum-Superpositions QM-like superpositions in Perl Icon FreeBSD.png 1329059652.png
pagmo2 Platform to perform parallel computations of optimization tasks Icon FreeBSD.png 1329059652.png
paraview Powerful scientific data visualization application Icon FreeBSD.png 1329059652.png
parmgridgen Library for obtaining a sequence of successive coarse grids Icon FreeBSD.png 1329059652.png
plinkseq Toolset for working with human genetic variation data Icon FreeBSD.png 1329059652.png
plplot Scientific plotting package Icon FreeBSD.png 1329059652.png
pnetcdf Library providing high-performance I/O Icon FreeBSD.png 1329059652.png
praat Phonetics by Computer Icon FreeBSD.png 1329059652.png
psychopy Psychophysics toolkit for Python Icon FreeBSD.png 1329059652.png
pulseview GUI client that supports various hardware logic analyzers Icon FreeBSD.png 1329059652.png
py27-DendroPy Phylogenetic computing library Icon FreeBSD.png 1329059652.png
py27-GPy Gaussian process toolbox Icon FreeBSD.png 1329059652.png
py27-GPyOpt Bayesian optimization toolbox based on GPy Icon FreeBSD.png 1329059652.png
py27-OpenFermion Electronic structure package for quantum computers Icon FreeBSD.png 1329059652.png
If you don't find a package, you are looking for,
we recommend to search the Icon FreeBSD.pngCategory Science in tne Ports Collection.
Back to Icon Disti GhostBSD.png Science and Engineering
Retrieved from "http://wiki.ghostbsd.org/index.php?title=Science&oldid=3972"