Biology

Welcome to the Biology

App/Package	Abstract	Addition or Link
CheckM	Quality assessment tool for the microbial genomes	[[1]] [[2]]
GroopM	Metagenomic binning suite	[[3]] [[4]]
InsightToolkit	Insight Toolkit	[[5]] [[6]]
Jellyfish	Fast, memory-efficient counting of k-mers in DNA	[[7]] [[8]]
abyss	Assembly By Short Sequences: parallel, paired-end sequence assembler	[[9]] [[10]]
afni	Advanced Functional Neuro Imaging	[[11]] [[12]]
artemis	DNA sequence viewer and annotation tool	[[13]] [[14]]
avida	Auto-adaptive genetic system designed for ALife research	[[15]] [[16]]
babel	Converts among various molecular file formats	[[17]] [[18]]
bamtools	API and toolkit for handling BAM files	[[19]]
biococoa	Bioinformatics framework	[[20]] [[21]]
canu	Single molecule sequence assembler	[[22]] [[23]]
cycle	Calendar program for women	[[24]] [[25]]
cytoscape	Software to visualize molecular interaction networks, gene expression	[[26]] [[27]]
dDocent	Bash pipeline for RAD sequencing	[[28]] [[29]]
emboss	Collection of open source tools for genetic sequence analysis	[[30]] [[31]]
figtree	Graphical viewer of phylogenetic trees	[[32]] [[33]]
garlic	Molecular viewer, editor, and visualization program	[[34]] [[35]]
gperiodic	Displays a periodic table of the elements	[[36]] [[37]]
haplohseq	Identify regions of allelic imbalance	[[38]] [[39]]
hhsuite	Remote protein homology detection suite	[[40]] [[41]]
igv	Visualization tool for genomic datasets	[[42]] [[43]]
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If you don't find a package, you are looking for, we recommend to search the Ports Collection.
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